Cluster: HRGMv2_0378_CGC25
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 11
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_10 | HRGMv2_0378_10_51 | 58744 | 59355 | - | 9.B.18.1.1 |
| CAZyme | HRGMv2_0378_10 | HRGMv2_0378_10_52 | 59364 | 60482 | - | GT4 |
| CAZyme | HRGMv2_0378_10 | HRGMv2_0378_10_53 | 60530 | 61204 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_0378_10 | HRGMv2_0378_10_54 | 61174 | 61770 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0378_10 | HRGMv2_0378_10_55 | 61767 | 62906 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_0378_10 | HRGMv2_0378_10_56 | 62903 | 64216 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0378_10 | HRGMv2_0378_10_57 | 64213 | 65202 | - | GT2 |
| CAZyme | HRGMv2_0378_10 | HRGMv2_0378_10_58 | 65208 | 66338 | - | GT4 |
| CAZyme | HRGMv2_0378_10 | HRGMv2_0378_10_59 | 66344 | 67198 | - | GT14 |
| CAZyme | HRGMv2_0378_10 | HRGMv2_0378_10_60 | 67199 | 68116 | - | GT101 |
| CAZyme | HRGMv2_0378_10 | HRGMv2_0378_10_61 | 68164 | 69081 | - | GT32 |
| pfam | HRGMv2_0378_10 | HRGMv2_0378_10_62 | 69105 | 70214 | - | PS_pyruv_trans |
| STP | HRGMv2_0378_10 | HRGMv2_0378_10_63 | 70225 | 71352 | - | Fer4 |
| CAZyme | HRGMv2_0378_10 | HRGMv2_0378_10_64 | 71349 | 72209 | - | GT14 |
| CAZyme | HRGMv2_0378_10 | HRGMv2_0378_10_65 | 72238 | 73266 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_0378_10 | HRGMv2_0378_10_66 | 73287 | 74330 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0378_10 | HRGMv2_0378_10_67 | 74391 | 75452 | - | Glycos_transf_2 | CgtA |
| CAZyme | HRGMv2_0378_10 | HRGMv2_0378_10_68 | 75478 | 76443 | - | GT2 |
Gene ID: HRGMv2_0378_10_51
Type: TC
Location: 58744 - 59355 (-)
Type: TC
Location: 58744 - 59355 (-)
Gene ID: HRGMv2_0378_10_52
Type: CAZyme
Location: 59364 - 60482 (-)
Type: CAZyme
Location: 59364 - 60482 (-)
Gene ID: HRGMv2_0378_10_53
Type: CAZyme
Location: 60530 - 61204 (-)
Type: CAZyme
Location: 60530 - 61204 (-)
Gene ID: HRGMv2_0378_10_54
Type:
Location: 61174 - 61770 (-)
Type:
Location: 61174 - 61770 (-)
Gene ID: HRGMv2_0378_10_55
Type: CAZyme
Location: 61767 - 62906 (-)
Type: CAZyme
Location: 61767 - 62906 (-)
Gene ID: HRGMv2_0378_10_56
Type:
Location: 62903 - 64216 (-)
Type:
Location: 62903 - 64216 (-)
Gene ID: HRGMv2_0378_10_57
Type: CAZyme
Location: 64213 - 65202 (-)
Type: CAZyme
Location: 64213 - 65202 (-)
Gene ID: HRGMv2_0378_10_58
Type: CAZyme
Location: 65208 - 66338 (-)
Type: CAZyme
Location: 65208 - 66338 (-)
Gene ID: HRGMv2_0378_10_59
Type: CAZyme
Location: 66344 - 67198 (-)
Type: CAZyme
Location: 66344 - 67198 (-)
Gene ID: HRGMv2_0378_10_60
Type: CAZyme
Location: 67199 - 68116 (-)
Type: CAZyme
Location: 67199 - 68116 (-)
Gene ID: HRGMv2_0378_10_61
Type: CAZyme
Location: 68164 - 69081 (-)
Type: CAZyme
Location: 68164 - 69081 (-)
Gene ID: HRGMv2_0378_10_62
Type: pfam
Location: 69105 - 70214 (-)
Type: pfam
Location: 69105 - 70214 (-)
Gene ID: HRGMv2_0378_10_63
Type: STP
Location: 70225 - 71352 (-)
Type: STP
Location: 70225 - 71352 (-)
Gene ID: HRGMv2_0378_10_64
Type: CAZyme
Location: 71349 - 72209 (-)
Type: CAZyme
Location: 71349 - 72209 (-)
Gene ID: HRGMv2_0378_10_65
Type: CAZyme
Location: 72238 - 73266 (-)
Type: CAZyme
Location: 72238 - 73266 (-)
Gene ID: HRGMv2_0378_10_66
Type:
Location: 73287 - 74330 (-)
Type:
Location: 73287 - 74330 (-)
Gene ID: HRGMv2_0378_10_67
Type: pfam
Location: 74391 - 75452 (-)
Type: pfam
Location: 74391 - 75452 (-)
Gene ID: HRGMv2_0378_10_68
Type: CAZyme
Location: 75478 - 76443 (-)
Type: CAZyme
Location: 75478 - 76443 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.