Cluster: HRGMv2_0378_CGC24
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_9 | HRGMv2_0378_9_9 | 15798 | 17885 | - | GH42 |
| pfam | HRGMv2_0378_9 | HRGMv2_0378_9_10 | 17976 | 21335 | - | TPR_8 | TPR_8 | TPR_8 | TPR_8 | DUF5107 |
| sulfatase | HRGMv2_0378_9 | HRGMv2_0378_9_11 | 21363 | 22061 | - | S1_8 |
| TC | HRGMv2_0378_9 | HRGMv2_0378_9_12 | 22081 | 23469 | - | 2.A.1.1.3 |
| CAZyme | HRGMv2_0378_9 | HRGMv2_0378_9_13 | 23493 | 26267 | - | GH2 |
| CAZyme | HRGMv2_0378_9 | HRGMv2_0378_9_14 | 26638 | 28920 | - | GH105 | GH154 |
| CAZyme | HRGMv2_0378_9 | HRGMv2_0378_9_15 | 28961 | 31180 | - | CBM67 | GH78 |
| CAZyme | HRGMv2_0378_9 | HRGMv2_0378_9_16 | 31192 | 32607 | - | CE20 |
| TF | HRGMv2_0378_9 | HRGMv2_0378_9_17 | 33066 | 33947 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0378_9 | HRGMv2_0378_9_18 | 34056 | 36449 | - | GH95 |
| CAZyme | HRGMv2_0378_9 | HRGMv2_0378_9_19 | 36706 | 38085 | + | CBM32 | GH43_34 |
| CAZyme | HRGMv2_0378_9 | HRGMv2_0378_9_20 | 38106 | 39704 | + | CBM91 | GH43_10 |
Gene ID: HRGMv2_0378_9_9
Type: CAZyme
Location: 15798 - 17885 (-)
Type: CAZyme
Location: 15798 - 17885 (-)
Gene ID: HRGMv2_0378_9_10
Type: pfam
Location: 17976 - 21335 (-)
Type: pfam
Location: 17976 - 21335 (-)
Gene ID: HRGMv2_0378_9_11
Type: sulfatase
Location: 21363 - 22061 (-)
Type: sulfatase
Location: 21363 - 22061 (-)
Gene ID: HRGMv2_0378_9_12
Type: TC
Location: 22081 - 23469 (-)
Type: TC
Location: 22081 - 23469 (-)
Gene ID: HRGMv2_0378_9_13
Type: CAZyme
Location: 23493 - 26267 (-)
Type: CAZyme
Location: 23493 - 26267 (-)
Gene ID: HRGMv2_0378_9_14
Type: CAZyme
Location: 26638 - 28920 (-)
Type: CAZyme
Location: 26638 - 28920 (-)
Gene ID: HRGMv2_0378_9_15
Type: CAZyme
Location: 28961 - 31180 (-)
Type: CAZyme
Location: 28961 - 31180 (-)
Gene ID: HRGMv2_0378_9_16
Type: CAZyme
Location: 31192 - 32607 (-)
Type: CAZyme
Location: 31192 - 32607 (-)
Gene ID: HRGMv2_0378_9_17
Type: TF
Location: 33066 - 33947 (+)
Type: TF
Location: 33066 - 33947 (+)
Gene ID: HRGMv2_0378_9_18
Type: CAZyme
Location: 34056 - 36449 (-)
Type: CAZyme
Location: 34056 - 36449 (-)
Gene ID: HRGMv2_0378_9_19
Type: CAZyme
Location: 36706 - 38085 (+)
Type: CAZyme
Location: 36706 - 38085 (+)
Gene ID: HRGMv2_0378_9_20
Type: CAZyme
Location: 38106 - 39704 (+)
Type: CAZyme
Location: 38106 - 39704 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.