Cluster: HRGMv2_0378_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0378
- CGC Family ID: CGCFAM_04648
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_6 | HRGMv2_0378_6_82 | 104621 | 106528 | + | GH43_19 | GH43_29 |
| CAZyme | HRGMv2_0378_6 | HRGMv2_0378_6_83 | 106720 | 108717 | - | GH20 |
| pfam | HRGMv2_0378_6 | HRGMv2_0378_6_84 | 109127 | 110023 | - | THF_DHG_CYH | THF_DHG_CYH_C |
| TC | HRGMv2_0378_6 | HRGMv2_0378_6_85 | 110023 | 111366 | - | 3.A.5.1.1 |
Gene ID: HRGMv2_0378_6_82
Type: CAZyme
Location: 104621 - 106528 (+)
Type: CAZyme
Location: 104621 - 106528 (+)
Gene ID: HRGMv2_0378_6_83
Type: CAZyme
Location: 106720 - 108717 (-)
Type: CAZyme
Location: 106720 - 108717 (-)
Gene ID: HRGMv2_0378_6_84
Type: pfam
Location: 109127 - 110023 (-)
Type: pfam
Location: 109127 - 110023 (-)
Gene ID: HRGMv2_0378_6_85
Type: TC
Location: 110023 - 111366 (-)
Type: TC
Location: 110023 - 111366 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.