Cluster: HRGMv2_0378_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_5 | HRGMv2_0378_5_36 | 50866 | 52761 | + | 3.A.3.6.5 |
| TF | HRGMv2_0378_5 | HRGMv2_0378_5_37 | 52830 | 53249 | + | FUR |
| pfam | HRGMv2_0378_5 | HRGMv2_0378_5_38 | 53325 | 53696 | + | 4HBT | FlK |
| CAZyme | HRGMv2_0378_5 | HRGMv2_0378_5_39 | 53753 | 55744 | + | GH43_19 | GH43_34 |
Gene ID: HRGMv2_0378_5_36
Type: TC
Location: 50866 - 52761 (+)
Type: TC
Location: 50866 - 52761 (+)
Gene ID: HRGMv2_0378_5_37
Type: TF
Location: 52830 - 53249 (+)
Type: TF
Location: 52830 - 53249 (+)
Gene ID: HRGMv2_0378_5_38
Type: pfam
Location: 53325 - 53696 (+)
Type: pfam
Location: 53325 - 53696 (+)
Gene ID: HRGMv2_0378_5_39
Type: CAZyme
Location: 53753 - 55744 (+)
Type: CAZyme
Location: 53753 - 55744 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.