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Cluster: HRGMv2_0378_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0378_1 HRGMv2_0378_1_14 18978 21584 + 9.B.144.1.4
pfam HRGMv2_0378_1 HRGMv2_0378_1_15 21679 22053 - bPH_1
TC HRGMv2_0378_1 HRGMv2_0378_1_16 22115 23347 - 9.B.156.3.1
NULL(UNKNOWN) HRGMv2_0378_1 HRGMv2_0378_1_17 23424 24113 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0378_1 HRGMv2_0378_1_18 24395 24781 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0378_1 HRGMv2_0378_1_19 24887 26752 + 2.A.47.4.8
CAZyme HRGMv2_0378_1 HRGMv2_0378_1_20 26802 27716 - CE1
CAZyme HRGMv2_0378_1 HRGMv2_0378_1_21 27766 28875 - GH10
pfam HRGMv2_0378_1 HRGMv2_0378_1_22 29119 30018 + Semialdhyde_dh | GFO_IDH_MocA | CoA_binding | NAD_binding_3 | DAPDH_C
CAZyme HRGMv2_0378_1 HRGMv2_0378_1_23 30265 31953 - GH35
Gene ID: HRGMv2_0378_1_14
Type: TC
Location: 18978 - 21584 (+)
Gene ID: HRGMv2_0378_1_15
Type: pfam
Location: 21679 - 22053 (-)
Gene ID: HRGMv2_0378_1_16
Type: TC
Location: 22115 - 23347 (-)
Gene ID: HRGMv2_0378_1_17
Type:
Location: 23424 - 24113 (-)
Gene ID: HRGMv2_0378_1_18
Type:
Location: 24395 - 24781 (+)
Gene ID: HRGMv2_0378_1_19
Type: TC
Location: 24887 - 26752 (+)
Gene ID: HRGMv2_0378_1_20
Type: CAZyme
Location: 26802 - 27716 (-)
Gene ID: HRGMv2_0378_1_21
Type: CAZyme
Location: 27766 - 28875 (-)
Gene ID: HRGMv2_0378_1_22
Type: pfam
Location: 29119 - 30018 (+)
Gene ID: HRGMv2_0378_1_23
Type: CAZyme
Location: 30265 - 31953 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
43-108
→
Species
43-108 sp001915545

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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