Cluster: HRGMv2_0378_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_4 | HRGMv2_0378_4_92 | 105889 | 108297 | - | 1.B.14.6.7 |
| CAZyme | HRGMv2_0378_4 | HRGMv2_0378_4_93 | 108424 | 110805 | - | GH35 |
| NULL(UNKNOWN) | HRGMv2_0378_4 | HRGMv2_0378_4_94 | 110840 | 111154 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_0378_4 | HRGMv2_0378_4_95 | 111058 | 111525 | - | AraC_binding |
| CAZyme | HRGMv2_0378_4 | HRGMv2_0378_4_96 | 111539 | 113728 | - | PL8_3 |
Gene ID: HRGMv2_0378_4_92
Type: TC
Location: 105889 - 108297 (-)
Type: TC
Location: 105889 - 108297 (-)
Gene ID: HRGMv2_0378_4_93
Type: CAZyme
Location: 108424 - 110805 (-)
Type: CAZyme
Location: 108424 - 110805 (-)
Gene ID: HRGMv2_0378_4_94
Type:
Location: 110840 - 111154 (+)
Type:
Location: 110840 - 111154 (+)
Gene ID: HRGMv2_0378_4_95
Type: STP
Location: 111058 - 111525 (-)
Type: STP
Location: 111058 - 111525 (-)
Gene ID: HRGMv2_0378_4_96
Type: CAZyme
Location: 111539 - 113728 (-)
Type: CAZyme
Location: 111539 - 113728 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.