Cluster: HRGMv2_0378_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_4 | HRGMv2_0378_4_67 | 77464 | 78321 | + | GH16_3 |
| sulfatase | HRGMv2_0378_4 | HRGMv2_0378_4_68 | 78416 | 80203 | + | S1_97 |
| NULL(UNKNOWN) | HRGMv2_0378_4 | HRGMv2_0378_4_69 | 80652 | 81083 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0378_4 | HRGMv2_0378_4_70 | 81288 | 82649 | + | 3.A.18.1.1 |
Gene ID: HRGMv2_0378_4_67
Type: CAZyme
Location: 77464 - 78321 (+)
Type: CAZyme
Location: 77464 - 78321 (+)
Gene ID: HRGMv2_0378_4_68
Type: sulfatase
Location: 78416 - 80203 (+)
Type: sulfatase
Location: 78416 - 80203 (+)
Gene ID: HRGMv2_0378_4_69
Type:
Location: 80652 - 81083 (+)
Type:
Location: 80652 - 81083 (+)
Gene ID: HRGMv2_0378_4_70
Type: TC
Location: 81288 - 82649 (+)
Type: TC
Location: 81288 - 82649 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0378_4_68 | vegetarian > omnivore | 1.26700 | 0.01057 |