Cluster: HRGMv2_0378_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- CGC Family ID: CGCFAM_04936
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_3 | HRGMv2_0378_3_58 | 92592 | 95516 | - | 1.C.105.2.12 |
| NULL(UNKNOWN) | HRGMv2_0378_3 | HRGMv2_0378_3_59 | 96217 | 96687 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_0378_3 | HRGMv2_0378_3_60 | 96936 | 97799 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0378_3 | HRGMv2_0378_3_61 | 97838 | 100804 | + | GH115 |
Gene ID: HRGMv2_0378_3_58
Type: TC
Location: 92592 - 95516 (-)
Type: TC
Location: 92592 - 95516 (-)
Gene ID: HRGMv2_0378_3_59
Type:
Location: 96217 - 96687 (+)
Type:
Location: 96217 - 96687 (+)
Gene ID: HRGMv2_0378_3_60
Type: TF
Location: 96936 - 97799 (-)
Type: TF
Location: 96936 - 97799 (-)
Gene ID: HRGMv2_0378_3_61
Type: CAZyme
Location: 97838 - 100804 (+)
Type: CAZyme
Location: 97838 - 100804 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.