Cluster: HRGMv2_0378_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- CGC Family ID: CGCFAM_00795
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_3 | HRGMv2_0378_3_5 | 5121 | 6260 | - | GH105 |
| pfam | HRGMv2_0378_3 | HRGMv2_0378_3_6 | 6457 | 6936 | - | YgbB |
| TC | HRGMv2_0378_3 | HRGMv2_0378_3_7 | 6973 | 8160 | - | 1.B.57.4.6 |
Gene ID: HRGMv2_0378_3_5
Type: CAZyme
Location: 5121 - 6260 (-)
Type: CAZyme
Location: 5121 - 6260 (-)
Gene ID: HRGMv2_0378_3_6
Type: pfam
Location: 6457 - 6936 (-)
Type: pfam
Location: 6457 - 6936 (-)
Gene ID: HRGMv2_0378_3_7
Type: TC
Location: 6973 - 8160 (-)
Type: TC
Location: 6973 - 8160 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.