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Cluster: HRGMv2_0378_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0378_2 HRGMv2_0378_2_130 150561 152891 - PL39
CAZyme HRGMv2_0378_2 HRGMv2_0378_2_131 153175 155115 + GH97
TF HRGMv2_0378_2 HRGMv2_0378_2_132 155160 158090 + HTH_AraC
CAZyme HRGMv2_0378_2 HRGMv2_0378_2_133 158369 159679 + GH88
NULL(UNKNOWN) HRGMv2_0378_2 HRGMv2_0378_2_134 160084 162837 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0378_2 HRGMv2_0378_2_135 163037 164494 + GH28
pfam HRGMv2_0378_2 HRGMv2_0378_2_136 164621 165901 - OEP | OEP
TC HRGMv2_0378_2 HRGMv2_0378_2_137 165909 168962 - 2.A.6.2.38
TC HRGMv2_0378_2 HRGMv2_0378_2_138 168962 169966 - 2.A.6.2.27
Gene ID: HRGMv2_0378_2_130
Type: CAZyme
Location: 150561 - 152891 (-)
Gene ID: HRGMv2_0378_2_131
Type: CAZyme
Location: 153175 - 155115 (+)
Gene ID: HRGMv2_0378_2_132
Type: TF
Location: 155160 - 158090 (+)
Gene ID: HRGMv2_0378_2_133
Type: CAZyme
Location: 158369 - 159679 (+)
Gene ID: HRGMv2_0378_2_134
Type:
Location: 160084 - 162837 (+)
Gene ID: HRGMv2_0378_2_135
Type: CAZyme
Location: 163037 - 164494 (+)
Gene ID: HRGMv2_0378_2_136
Type: pfam
Location: 164621 - 165901 (-)
Gene ID: HRGMv2_0378_2_137
Type: TC
Location: 165909 - 168962 (-)
Gene ID: HRGMv2_0378_2_138
Type: TC
Location: 168962 - 169966 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
43-108
→
Species
43-108 sp001915545

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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