Cluster: HRGMv2_0378_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0378_2 | HRGMv2_0378_2_98 | 118335 | 119246 | + | 1.A.1.24.3 |
| pfam | HRGMv2_0378_2 | HRGMv2_0378_2_99 | 119324 | 120271 | - | MliC | Lipocalin_3 |
| CAZyme | HRGMv2_0378_2 | HRGMv2_0378_2_100 | 120295 | 121077 | - | GH16_3 |
Gene ID: HRGMv2_0378_2_98
Type: TC
Location: 118335 - 119246 (+)
Type: TC
Location: 118335 - 119246 (+)
Gene ID: HRGMv2_0378_2_99
Type: pfam
Location: 119324 - 120271 (-)
Type: pfam
Location: 119324 - 120271 (-)
Gene ID: HRGMv2_0378_2_100
Type: CAZyme
Location: 120295 - 121077 (-)
Type: CAZyme
Location: 120295 - 121077 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.