Cluster: HRGMv2_0378_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0378_1 | HRGMv2_0378_1_7 | 8488 | 10683 | - | GH36 |
| pfam | HRGMv2_0378_1 | HRGMv2_0378_1_8 | 10918 | 11838 | - | KduI |
| TC | HRGMv2_0378_1 | HRGMv2_0378_1_9 | 11894 | 13294 | - | 4.A.5.1.2 |
Gene ID: HRGMv2_0378_1_7
Type: CAZyme
Location: 8488 - 10683 (-)
Type: CAZyme
Location: 8488 - 10683 (-)
Gene ID: HRGMv2_0378_1_8
Type: pfam
Location: 10918 - 11838 (-)
Type: pfam
Location: 10918 - 11838 (-)
Gene ID: HRGMv2_0378_1_9
Type: TC
Location: 11894 - 13294 (-)
Type: TC
Location: 11894 - 13294 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
43-108
Species
43-108 sp001915545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.