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Cluster: HRGMv2_0373_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0373_1 HRGMv2_0373_1_414 492010 493152 + 9.B.146.1.4
pfam HRGMv2_0373_1 HRGMv2_0373_1_415 493166 495601 + Poly_export | SLBB | SLBB | SLBB | SLBB | SLBB | SLBB_2
pfam HRGMv2_0373_1 HRGMv2_0373_1_416 495746 496753 + F_bP_aldolase
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_417 496999 497820 - GT2
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_418 497817 498605 - GT32
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_419 498563 499411 - GT2
TC HRGMv2_0373_1 HRGMv2_0373_1_420 499416 500450 - 9.B.183.1.5
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_421 500476 501549 - GT4
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_422 501554 502531 - GT2
Gene ID: HRGMv2_0373_1_414
Type: TC
Location: 492010 - 493152 (+)
Gene ID: HRGMv2_0373_1_415
Type: pfam
Location: 493166 - 495601 (+)
Gene ID: HRGMv2_0373_1_416
Type: pfam
Location: 495746 - 496753 (+)
Gene ID: HRGMv2_0373_1_417
Type: CAZyme
Location: 496999 - 497820 (-)
Gene ID: HRGMv2_0373_1_418
Type: CAZyme
Location: 497817 - 498605 (-)
Gene ID: HRGMv2_0373_1_419
Type: CAZyme
Location: 498563 - 499411 (-)
Gene ID: HRGMv2_0373_1_420
Type: TC
Location: 499416 - 500450 (-)
Gene ID: HRGMv2_0373_1_421
Type: CAZyme
Location: 500476 - 501549 (-)
Gene ID: HRGMv2_0373_1_422
Type: CAZyme
Location: 501554 - 502531 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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