Cluster: HRGMv2_0373_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0373
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0373_1 | HRGMv2_0373_1_253 | 297759 | 300902 | + | 2.A.6.2.38 |
| pfam | HRGMv2_0373_1 | HRGMv2_0373_1_254 | 300941 | 302233 | + | OEP | OEP |
| CAZyme | HRGMv2_0373_1 | HRGMv2_0373_1_255 | 302482 | 303528 | + | GH43_33 |
Gene ID: HRGMv2_0373_1_253
Type: TC
Location: 297759 - 300902 (+)
Type: TC
Location: 297759 - 300902 (+)
Gene ID: HRGMv2_0373_1_254
Type: pfam
Location: 300941 - 302233 (+)
Type: pfam
Location: 300941 - 302233 (+)
Gene ID: HRGMv2_0373_1_255
Type: CAZyme
Location: 302482 - 303528 (+)
Type: CAZyme
Location: 302482 - 303528 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900545315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.