Cluster: HRGMv2_0373_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0373
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0373_1 | HRGMv2_0373_1_228 | 269213 | 270505 | + | 9.A.40.2.2 |
| pfam | HRGMv2_0373_1 | HRGMv2_0373_1_229 | 270629 | 272701 | + | Rotamase | Rotamase_2 | Rotamase_3 | SurA_N_2 | SurA_N_3 |
| TF | HRGMv2_0373_1 | HRGMv2_0373_1_230 | 272844 | 273509 | + | 0037767 |
| CAZyme | HRGMv2_0373_1 | HRGMv2_0373_1_231 | 273515 | 274876 | + | GT30 |
Gene ID: HRGMv2_0373_1_228
Type: TC
Location: 269213 - 270505 (+)
Type: TC
Location: 269213 - 270505 (+)
Gene ID: HRGMv2_0373_1_229
Type: pfam
Location: 270629 - 272701 (+)
Type: pfam
Location: 270629 - 272701 (+)
Gene ID: HRGMv2_0373_1_230
Type: TF
Location: 272844 - 273509 (+)
Type: TF
Location: 272844 - 273509 (+)
Gene ID: HRGMv2_0373_1_231
Type: CAZyme
Location: 273515 - 274876 (+)
Type: CAZyme
Location: 273515 - 274876 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900545315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.