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Cluster: HRGMv2_0373_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_201 228899 231796 - GH106
pfam HRGMv2_0373_1 HRGMv2_0373_1_202 231834 234551 - GH123_N
NULL(UNKNOWN) HRGMv2_0373_1 HRGMv2_0373_1_203 234552 234671 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_204 234679 236934 - GH141
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_205 237025 238704 - GH156
TC HRGMv2_0373_1 HRGMv2_0373_1_206 239360 242887 + 1.B.14.6.1
pfam HRGMv2_0373_1 HRGMv2_0373_1_207 242900 244546 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_208 244939 247095 + GH141
Gene ID: HRGMv2_0373_1_201
Type: CAZyme
Location: 228899 - 231796 (-)
Gene ID: HRGMv2_0373_1_202
Type: pfam
Location: 231834 - 234551 (-)
Gene ID: HRGMv2_0373_1_203
Type:
Location: 234552 - 234671 (+)
Gene ID: HRGMv2_0373_1_204
Type: CAZyme
Location: 234679 - 236934 (-)
Gene ID: HRGMv2_0373_1_205
Type: CAZyme
Location: 237025 - 238704 (-)
Gene ID: HRGMv2_0373_1_206
Type: TC
Location: 239360 - 242887 (+)
Gene ID: HRGMv2_0373_1_207
Type: pfam
Location: 242900 - 244546 (+)
Gene ID: HRGMv2_0373_1_208
Type: CAZyme
Location: 244939 - 247095 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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