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Cluster: HRGMv2_0373_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_109 147392 148108 - GT51
STP HRGMv2_0373_1 HRGMv2_0373_1_110 148307 151876 + Fer4
NULL(UNKNOWN) HRGMv2_0373_1 HRGMv2_0373_1_111 152130 152453 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0373_1 HRGMv2_0373_1_112 152651 153991 + 2.A.38.1.1
pfam HRGMv2_0373_1 HRGMv2_0373_1_113 154103 155605 + GH3 | GH3_M | GH3_C
pfam HRGMv2_0373_1 HRGMv2_0373_1_114 155817 156779 + 2-Hacid_dh | 2-Hacid_dh_C
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_115 156804 157979 + GT4
TC HRGMv2_0373_1 HRGMv2_0373_1_116 157939 159318 - 2.A.1.2.97
Gene ID: HRGMv2_0373_1_109
Type: CAZyme
Location: 147392 - 148108 (-)
Gene ID: HRGMv2_0373_1_110
Type: STP
Location: 148307 - 151876 (+)
Gene ID: HRGMv2_0373_1_111
Type:
Location: 152130 - 152453 (-)
Gene ID: HRGMv2_0373_1_112
Type: TC
Location: 152651 - 153991 (+)
Gene ID: HRGMv2_0373_1_113
Type: pfam
Location: 154103 - 155605 (+)
Gene ID: HRGMv2_0373_1_114
Type: pfam
Location: 155817 - 156779 (+)
Gene ID: HRGMv2_0373_1_115
Type: CAZyme
Location: 156804 - 157979 (+)
Gene ID: HRGMv2_0373_1_116
Type: TC
Location: 157939 - 159318 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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