Cluster: HRGMv2_0373_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0373
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0373_13 | HRGMv2_0373_13_16 | 20017 | 20775 | - | 3.A.1.140.1 |
| pfam | HRGMv2_0373_13 | HRGMv2_0373_13_17 | 21065 | 21811 | + | Calycin_like |
| CAZyme | HRGMv2_0373_13 | HRGMv2_0373_13_18 | 22026 | 24701 | - | CBM67 | GH78 |
Gene ID: HRGMv2_0373_13_16
Type: TC
Location: 20017 - 20775 (-)
Type: TC
Location: 20017 - 20775 (-)
Gene ID: HRGMv2_0373_13_17
Type: pfam
Location: 21065 - 21811 (+)
Type: pfam
Location: 21065 - 21811 (+)
Gene ID: HRGMv2_0373_13_18
Type: CAZyme
Location: 22026 - 24701 (-)
Type: CAZyme
Location: 22026 - 24701 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900545315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.