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Cluster: HRGMv2_0373_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0373_7 HRGMv2_0373_7_40 51112 52782 + GH36
pfam HRGMv2_0373_7 HRGMv2_0373_7_41 52791 53204 - Rhomboid
NULL(UNKNOWN) HRGMv2_0373_7 HRGMv2_0373_7_42 53793 53927 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0373_7 HRGMv2_0373_7_43 53930 55942 + GH97
NULL(UNKNOWN) HRGMv2_0373_7 HRGMv2_0373_7_44 56799 56963 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0373_7 HRGMv2_0373_7_45 56987 58204 + 3.B.1.1.4
NULL(UNKNOWN) HRGMv2_0373_7 HRGMv2_0373_7_46 58727 59311 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0373_7 HRGMv2_0373_7_47 59965 60174 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0373_7 HRGMv2_0373_7_48 60236 61669 - 2.A.6.2.20
TC HRGMv2_0373_7 HRGMv2_0373_7_49 61677 64826 - 2.A.6.2.44
TC HRGMv2_0373_7 HRGMv2_0373_7_50 64853 65977 - 2.A.6.2.47
NULL(UNKNOWN) HRGMv2_0373_7 HRGMv2_0373_7_51 66110 66367 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0373_7 HRGMv2_0373_7_52 66441 66674 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0373_7 HRGMv2_0373_7_53 66671 66991 + 2.A.7.1.10
Gene ID: HRGMv2_0373_7_40
Type: CAZyme
Location: 51112 - 52782 (+)
Gene ID: HRGMv2_0373_7_41
Type: pfam
Location: 52791 - 53204 (-)
Gene ID: HRGMv2_0373_7_42
Type:
Location: 53793 - 53927 (+)
Gene ID: HRGMv2_0373_7_43
Type: CAZyme
Location: 53930 - 55942 (+)
Gene ID: HRGMv2_0373_7_44
Type:
Location: 56799 - 56963 (+)
Gene ID: HRGMv2_0373_7_45
Type: TC
Location: 56987 - 58204 (+)
Gene ID: HRGMv2_0373_7_46
Type:
Location: 58727 - 59311 (-)
Gene ID: HRGMv2_0373_7_47
Type:
Location: 59965 - 60174 (+)
Gene ID: HRGMv2_0373_7_48
Type: TC
Location: 60236 - 61669 (-)
Gene ID: HRGMv2_0373_7_49
Type: TC
Location: 61677 - 64826 (-)
Gene ID: HRGMv2_0373_7_50
Type: TC
Location: 64853 - 65977 (-)
Gene ID: HRGMv2_0373_7_51
Type:
Location: 66110 - 66367 (-)
Gene ID: HRGMv2_0373_7_52
Type:
Location: 66441 - 66674 (+)
Gene ID: HRGMv2_0373_7_53
Type: TC
Location: 66671 - 66991 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0373_7_46 vegan > omnivore 1.28773 0.00207

🧭 Explore Read Mapping of CGC

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