Cluster: HRGMv2_0373_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0373
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0373_6 | HRGMv2_0373_6_108 | 131413 | 134505 | + | 3.A.12.1.1 |
| pfam | HRGMv2_0373_6 | HRGMv2_0373_6_109 | 134517 | 135167 | + | LolA |
| pfam | HRGMv2_0373_6 | HRGMv2_0373_6_110 | 135460 | 135939 | - | DUF4293 |
| CAZyme | HRGMv2_0373_6 | HRGMv2_0373_6_111 | 136106 | 137632 | - | GT2 |
Gene ID: HRGMv2_0373_6_108
Type: TC
Location: 131413 - 134505 (+)
Type: TC
Location: 131413 - 134505 (+)
Gene ID: HRGMv2_0373_6_109
Type: pfam
Location: 134517 - 135167 (+)
Type: pfam
Location: 134517 - 135167 (+)
Gene ID: HRGMv2_0373_6_110
Type: pfam
Location: 135460 - 135939 (-)
Type: pfam
Location: 135460 - 135939 (-)
Gene ID: HRGMv2_0373_6_111
Type: CAZyme
Location: 136106 - 137632 (-)
Type: CAZyme
Location: 136106 - 137632 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900545315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.