dbCAN Logo

Cluster: HRGMv2_0373_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0373_5 HRGMv2_0373_5_83 93825 95744 + GH97
TC HRGMv2_0373_5 HRGMv2_0373_5_84 95902 97422 + 3.A.1.26.5
pfam HRGMv2_0373_5 HRGMv2_0373_5_85 97620 97943 - rhaM
CAZyme HRGMv2_0373_5 HRGMv2_0373_5_86 98059 100389 - GH95
NULL(UNKNOWN) HRGMv2_0373_5 HRGMv2_0373_5_87 101189 101320 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0373_5 HRGMv2_0373_5_88 101451 102749 - GH29
CAZyme HRGMv2_0373_5 HRGMv2_0373_5_89 103006 105345 + GH92
CAZyme HRGMv2_0373_5 HRGMv2_0373_5_90 105739 107148 + GH109
pfam HRGMv2_0373_5 HRGMv2_0373_5_91 107409 108497 + APH
CAZyme HRGMv2_0373_5 HRGMv2_0373_5_92 108943 109896 + GT2
CAZyme HRGMv2_0373_5 HRGMv2_0373_5_93 110075 111010 - GT2
Gene ID: HRGMv2_0373_5_83
Type: CAZyme
Location: 93825 - 95744 (+)
Gene ID: HRGMv2_0373_5_84
Type: TC
Location: 95902 - 97422 (+)
Gene ID: HRGMv2_0373_5_85
Type: pfam
Location: 97620 - 97943 (-)
Gene ID: HRGMv2_0373_5_86
Type: CAZyme
Location: 98059 - 100389 (-)
Gene ID: HRGMv2_0373_5_87
Type:
Location: 101189 - 101320 (+)
Gene ID: HRGMv2_0373_5_88
Type: CAZyme
Location: 101451 - 102749 (-)
Gene ID: HRGMv2_0373_5_89
Type: CAZyme
Location: 103006 - 105345 (+)
Gene ID: HRGMv2_0373_5_90
Type: CAZyme
Location: 105739 - 107148 (+)
Gene ID: HRGMv2_0373_5_91
Type: pfam
Location: 107409 - 108497 (+)
Gene ID: HRGMv2_0373_5_92
Type: CAZyme
Location: 108943 - 109896 (+)
Gene ID: HRGMv2_0373_5_93
Type: CAZyme
Location: 110075 - 111010 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0373_5_85 vegetarian > omnivore 2.54480 0.03580
HRGMv2_0373_5_89 vegetarian > omnivore 1.74219 0.03580

🧭 Explore Read Mapping of CGC

← Back to Cluster List