Cluster: HRGMv2_0373_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0373
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0373_4 | HRGMv2_0373_4_166 | 212775 | 214706 | + | CBM62 |
| pfam | HRGMv2_0373_4 | HRGMv2_0373_4_167 | 215055 | 221333 | - | Helicase_C | N6_Mtase |
| pfam | HRGMv2_0373_4 | HRGMv2_0373_4_168 | 221320 | 221769 | - | DUF1896 |
| TC | HRGMv2_0373_4 | HRGMv2_0373_4_169 | 221904 | 223997 | - | 3.A.7.7.1 |
Gene ID: HRGMv2_0373_4_166
Type: CAZyme
Location: 212775 - 214706 (+)
Type: CAZyme
Location: 212775 - 214706 (+)
Gene ID: HRGMv2_0373_4_167
Type: pfam
Location: 215055 - 221333 (-)
Type: pfam
Location: 215055 - 221333 (-)
Gene ID: HRGMv2_0373_4_168
Type: pfam
Location: 221320 - 221769 (-)
Type: pfam
Location: 221320 - 221769 (-)
Gene ID: HRGMv2_0373_4_169
Type: TC
Location: 221904 - 223997 (-)
Type: TC
Location: 221904 - 223997 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900545315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.