Cluster: HRGMv2_0373_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0373
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0373_3 | HRGMv2_0373_3_89 | 95011 | 96690 | - | 2.A.17.4.2 |
| CAZyme | HRGMv2_0373_3 | HRGMv2_0373_3_90 | 96878 | 98914 | + | GH13_8 |
| pfam | HRGMv2_0373_3 | HRGMv2_0373_3_91 | 99146 | 99697 | - | Hexapep | Mac | Hexapep_2 |
| pfam | HRGMv2_0373_3 | HRGMv2_0373_3_92 | 99710 | 100084 | - | GtrA_DPMS_TM |
| CAZyme | HRGMv2_0373_3 | HRGMv2_0373_3_93 | 100125 | 101981 | - | GT83 |
Gene ID: HRGMv2_0373_3_89
Type: TC
Location: 95011 - 96690 (-)
Type: TC
Location: 95011 - 96690 (-)
Gene ID: HRGMv2_0373_3_90
Type: CAZyme
Location: 96878 - 98914 (+)
Type: CAZyme
Location: 96878 - 98914 (+)
Gene ID: HRGMv2_0373_3_91
Type: pfam
Location: 99146 - 99697 (-)
Type: pfam
Location: 99146 - 99697 (-)
Gene ID: HRGMv2_0373_3_92
Type: pfam
Location: 99710 - 100084 (-)
Type: pfam
Location: 99710 - 100084 (-)
Gene ID: HRGMv2_0373_3_93
Type: CAZyme
Location: 100125 - 101981 (-)
Type: CAZyme
Location: 100125 - 101981 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900545315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.