Cluster: HRGMv2_0373_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0373
- CGC Family ID: CGCFAM_02706
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0373_2 | HRGMv2_0373_2_264 | 314943 | 316526 | - | 3.D.10.1.6 |
| CAZyme | HRGMv2_0373_2 | HRGMv2_0373_2_265 | 316526 | 317203 | - | GH25 |
| TC | HRGMv2_0373_2 | HRGMv2_0373_2_266 | 317802 | 320099 | + | 1.B.14.10.1 |
| pfam | HRGMv2_0373_2 | HRGMv2_0373_2_267 | 320488 | 321411 | + | Ion_trans_2 |
| TC | HRGMv2_0373_2 | HRGMv2_0373_2_268 | 321755 | 323062 | - | 2.A.13.1.3 |
Gene ID: HRGMv2_0373_2_264
Type: TC
Location: 314943 - 316526 (-)
Type: TC
Location: 314943 - 316526 (-)
Gene ID: HRGMv2_0373_2_265
Type: CAZyme
Location: 316526 - 317203 (-)
Type: CAZyme
Location: 316526 - 317203 (-)
Gene ID: HRGMv2_0373_2_266
Type: TC
Location: 317802 - 320099 (+)
Type: TC
Location: 317802 - 320099 (+)
Gene ID: HRGMv2_0373_2_267
Type: pfam
Location: 320488 - 321411 (+)
Type: pfam
Location: 320488 - 321411 (+)
Gene ID: HRGMv2_0373_2_268
Type: TC
Location: 321755 - 323062 (-)
Type: TC
Location: 321755 - 323062 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900545315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.