Cluster: HRGMv2_0373_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0373
- CGC Family ID: CGCFAM_08742
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0373_2 | HRGMv2_0373_2_151 | 175148 | 176476 | - | GH10 |
| NULL(UNKNOWN) | HRGMv2_0373_2 | HRGMv2_0373_2_152 | 176523 | 176651 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0373_2 | HRGMv2_0373_2_153 | 177063 | 179252 | - | 2.A.16.2.2 |
| TC | HRGMv2_0373_2 | HRGMv2_0373_2_154 | 179367 | 180089 | + | 1.B.42.1.2 |
Gene ID: HRGMv2_0373_2_151
Type: CAZyme
Location: 175148 - 176476 (-)
Type: CAZyme
Location: 175148 - 176476 (-)
Gene ID: HRGMv2_0373_2_152
Type:
Location: 176523 - 176651 (+)
Type:
Location: 176523 - 176651 (+)
Gene ID: HRGMv2_0373_2_153
Type: TC
Location: 177063 - 179252 (-)
Type: TC
Location: 177063 - 179252 (-)
Gene ID: HRGMv2_0373_2_154
Type: TC
Location: 179367 - 180089 (+)
Type: TC
Location: 179367 - 180089 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900545315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.