dbCAN Logo

Cluster: HRGMv2_0373_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0373_1 HRGMv2_0373_1_519 637382 639751 + 2.A.37.1.5
pfam HRGMv2_0373_1 HRGMv2_0373_1_520 640169 641620 + Mur_ligase | Mur_ligase_C | Mur_ligase_M
pfam HRGMv2_0373_1 HRGMv2_0373_1_521 641896 643596 + PQQ_2 | PQQ_2
TC HRGMv2_0373_1 HRGMv2_0373_1_522 643612 644859 + 9.B.146.1.6
pfam HRGMv2_0373_1 HRGMv2_0373_1_523 644862 646220 + Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N
TC HRGMv2_0373_1 HRGMv2_0373_1_524 646336 647640 + 2.A.103.1.2
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_525 647717 648844 + GT28
Gene ID: HRGMv2_0373_1_519
Type: TC
Location: 637382 - 639751 (+)
Gene ID: HRGMv2_0373_1_520
Type: pfam
Location: 640169 - 641620 (+)
Gene ID: HRGMv2_0373_1_521
Type: pfam
Location: 641896 - 643596 (+)
Gene ID: HRGMv2_0373_1_522
Type: TC
Location: 643612 - 644859 (+)
Gene ID: HRGMv2_0373_1_523
Type: pfam
Location: 644862 - 646220 (+)
Gene ID: HRGMv2_0373_1_524
Type: TC
Location: 646336 - 647640 (+)
Gene ID: HRGMv2_0373_1_525
Type: CAZyme
Location: 647717 - 648844 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List