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Cluster: HRGMv2_0373_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0373_1 HRGMv2_0373_1_485 595667 596332 - 9.B.20.1.4
CAZyme HRGMv2_0373_1 HRGMv2_0373_1_486 596558 599026 - GH3
TC HRGMv2_0373_1 HRGMv2_0373_1_487 599373 600956 - 1.I.1.1.3
NULL(UNKNOWN) HRGMv2_0373_1 HRGMv2_0373_1_488 601040 601261 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0373_1 HRGMv2_0373_1_489 601641 603059 + 2.A.115.2.14
NULL(UNKNOWN) HRGMv2_0373_1 HRGMv2_0373_1_490 603840 604190 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0373_1 HRGMv2_0373_1_491 604368 605468 + 2.A.6.2.20
TC HRGMv2_0373_1 HRGMv2_0373_1_492 605484 608567 + 2.A.6.1.6
TC HRGMv2_0373_1 HRGMv2_0373_1_493 608564 609832 + 2.A.6.1.5
Gene ID: HRGMv2_0373_1_485
Type: TC
Location: 595667 - 596332 (-)
Gene ID: HRGMv2_0373_1_486
Type: CAZyme
Location: 596558 - 599026 (-)
Gene ID: HRGMv2_0373_1_487
Type: TC
Location: 599373 - 600956 (-)
Gene ID: HRGMv2_0373_1_488
Type:
Location: 601040 - 601261 (+)
Gene ID: HRGMv2_0373_1_489
Type: TC
Location: 601641 - 603059 (+)
Gene ID: HRGMv2_0373_1_490
Type:
Location: 603840 - 604190 (+)
Gene ID: HRGMv2_0373_1_491
Type: TC
Location: 604368 - 605468 (+)
Gene ID: HRGMv2_0373_1_492
Type: TC
Location: 605484 - 608567 (+)
Gene ID: HRGMv2_0373_1_493
Type: TC
Location: 608564 - 609832 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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