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Cluster: HRGMv2_0372_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0372_2 HRGMv2_0372_2_126 169761 173051 + 1.B.14.6.13
TC HRGMv2_0372_2 HRGMv2_0372_2_127 173067 174605 + 8.A.46.2.1
CAZyme HRGMv2_0372_2 HRGMv2_0372_2_128 174633 175775 + GH18
pfam HRGMv2_0372_2 HRGMv2_0372_2_129 175801 177021 + BT_3987-like_N | Laminin_G_3
TC HRGMv2_0372_2 HRGMv2_0372_2_130 177531 178670 + 3.A.1.13.2
TC HRGMv2_0372_2 HRGMv2_0372_2_131 178683 179684 + 3.A.1.13.2
TC HRGMv2_0372_2 HRGMv2_0372_2_132 179690 180448 + 3.A.1.13.2
Gene ID: HRGMv2_0372_2_126
Type: TC
Location: 169761 - 173051 (+)
Gene ID: HRGMv2_0372_2_127
Type: TC
Location: 173067 - 174605 (+)
Gene ID: HRGMv2_0372_2_128
Type: CAZyme
Location: 174633 - 175775 (+)
Gene ID: HRGMv2_0372_2_129
Type: pfam
Location: 175801 - 177021 (+)
Gene ID: HRGMv2_0372_2_130
Type: TC
Location: 177531 - 178670 (+)
Gene ID: HRGMv2_0372_2_131
Type: TC
Location: 178683 - 179684 (+)
Gene ID: HRGMv2_0372_2_132
Type: TC
Location: 179690 - 180448 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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