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Cluster: HRGMv2_0372_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0372_17 HRGMv2_0372_17_17 19462 20043 - 2.A.51.1.6
NULL(UNKNOWN) HRGMv2_0372_17 HRGMv2_0372_17_18 20056 20514 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0372_17 HRGMv2_0372_17_19 20523 21086 - 2.A.51.1.6
TC HRGMv2_0372_17 HRGMv2_0372_17_20 21091 21855 - 3.D.1.4.3
CAZyme HRGMv2_0372_17 HRGMv2_0372_17_21 22133 23257 - CE8
TC HRGMv2_0372_17 HRGMv2_0372_17_22 23534 25063 - 3.D.1.9.3
TC HRGMv2_0372_17 HRGMv2_0372_17_23 25060 26460 - 3.D.1.9.1
NULL(UNKNOWN) HRGMv2_0372_17 HRGMv2_0372_17_24 26465 27094 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0372_17 HRGMv2_0372_17_25 27091 28005 - 3.D.1.9.3
TC HRGMv2_0372_17 HRGMv2_0372_17_26 28010 29998 - 3.D.1.9.1
Gene ID: HRGMv2_0372_17_17
Type: TC
Location: 19462 - 20043 (-)
Gene ID: HRGMv2_0372_17_18
Type:
Location: 20056 - 20514 (-)
Gene ID: HRGMv2_0372_17_19
Type: TC
Location: 20523 - 21086 (-)
Gene ID: HRGMv2_0372_17_20
Type: TC
Location: 21091 - 21855 (-)
Gene ID: HRGMv2_0372_17_21
Type: CAZyme
Location: 22133 - 23257 (-)
Gene ID: HRGMv2_0372_17_22
Type: TC
Location: 23534 - 25063 (-)
Gene ID: HRGMv2_0372_17_23
Type: TC
Location: 25060 - 26460 (-)
Gene ID: HRGMv2_0372_17_24
Type:
Location: 26465 - 27094 (-)
Gene ID: HRGMv2_0372_17_25
Type: TC
Location: 27091 - 28005 (-)
Gene ID: HRGMv2_0372_17_26
Type: TC
Location: 28010 - 29998 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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