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Cluster: HRGMv2_0372_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0372_17 HRGMv2_0372_17_3 4207 6237 - 1.I.1.1.3
pfam HRGMv2_0372_17 HRGMv2_0372_17_4 6327 7802 + tRNA-synt_1e | DALR_2 | tRNA-synt_1g | CysS_C
NULL(UNKNOWN) HRGMv2_0372_17 HRGMv2_0372_17_5 7835 8404 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0372_17 HRGMv2_0372_17_6 8578 9972 + 2.A.66.1.32
pfam HRGMv2_0372_17 HRGMv2_0372_17_7 9980 10615 + Cytidylate_kin2
pfam HRGMv2_0372_17 HRGMv2_0372_17_8 10627 11739 + RF-1 | PCRF
CAZyme HRGMv2_0372_17 HRGMv2_0372_17_9 11732 13033 + GH171
Gene ID: HRGMv2_0372_17_3
Type: TC
Location: 4207 - 6237 (-)
Gene ID: HRGMv2_0372_17_4
Type: pfam
Location: 6327 - 7802 (+)
Gene ID: HRGMv2_0372_17_5
Type:
Location: 7835 - 8404 (+)
Gene ID: HRGMv2_0372_17_6
Type: TC
Location: 8578 - 9972 (+)
Gene ID: HRGMv2_0372_17_7
Type: pfam
Location: 9980 - 10615 (+)
Gene ID: HRGMv2_0372_17_8
Type: pfam
Location: 10627 - 11739 (+)
Gene ID: HRGMv2_0372_17_9
Type: CAZyme
Location: 11732 - 13033 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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