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Cluster: HRGMv2_0372_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0372_2 HRGMv2_0372_2_17 22652 23437 + 9.B.14.3.3
pfam HRGMv2_0372_2 HRGMv2_0372_2_18 23501 24862 + Cytochrom_C | CCP_MauG | Haem_bd
pfam HRGMv2_0372_2 HRGMv2_0372_2_19 25138 26403 + MORN_2 | MORN_2
CAZyme HRGMv2_0372_2 HRGMv2_0372_2_20 26959 29115 - GH3
CAZyme HRGMv2_0372_2 HRGMv2_0372_2_21 29138 30646 - GH5_4
TF HRGMv2_0372_2 HRGMv2_0372_2_22 30736 34662 - HTH_AraC
TC HRGMv2_0372_2 HRGMv2_0372_2_23 34852 38046 + 1.B.14.6.2
TC HRGMv2_0372_2 HRGMv2_0372_2_24 38065 39747 + 8.A.46.2.2
NULL(UNKNOWN) HRGMv2_0372_2 HRGMv2_0372_2_25 39779 41032 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0372_2 HRGMv2_0372_2_26 41067 43313 + GH3
Gene ID: HRGMv2_0372_2_17
Type: TC
Location: 22652 - 23437 (+)
Gene ID: HRGMv2_0372_2_18
Type: pfam
Location: 23501 - 24862 (+)
Gene ID: HRGMv2_0372_2_19
Type: pfam
Location: 25138 - 26403 (+)
Gene ID: HRGMv2_0372_2_20
Type: CAZyme
Location: 26959 - 29115 (-)
Gene ID: HRGMv2_0372_2_21
Type: CAZyme
Location: 29138 - 30646 (-)
Gene ID: HRGMv2_0372_2_22
Type: TF
Location: 30736 - 34662 (-)
Gene ID: HRGMv2_0372_2_23
Type: TC
Location: 34852 - 38046 (+)
Gene ID: HRGMv2_0372_2_24
Type: TC
Location: 38065 - 39747 (+)
Gene ID: HRGMv2_0372_2_25
Type:
Location: 39779 - 41032 (+)
Gene ID: HRGMv2_0372_2_26
Type: CAZyme
Location: 41067 - 43313 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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