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Cluster: HRGMv2_0372_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0372_13 HRGMv2_0372_13_39 55248 55934 + 3.A.1.122.2
CAZyme HRGMv2_0372_13 HRGMv2_0372_13_40 56091 57947 - GH13_46
CAZyme HRGMv2_0372_13 HRGMv2_0372_13_41 58088 60718 - GH77
pfam HRGMv2_0372_13 HRGMv2_0372_13_42 60880 61539 + TAL_FSA
CAZyme HRGMv2_0372_13 HRGMv2_0372_13_43 61671 63848 - GH97
CAZyme HRGMv2_0372_13 HRGMv2_0372_13_44 63856 65745 - GH13_46
CAZyme HRGMv2_0372_13 HRGMv2_0372_13_45 65847 67166 - GH13
CAZyme HRGMv2_0372_13 HRGMv2_0372_13_46 67176 68489 - GH13
Gene ID: HRGMv2_0372_13_39
Type: TC
Location: 55248 - 55934 (+)
Gene ID: HRGMv2_0372_13_40
Type: CAZyme
Location: 56091 - 57947 (-)
Gene ID: HRGMv2_0372_13_41
Type: CAZyme
Location: 58088 - 60718 (-)
Gene ID: HRGMv2_0372_13_42
Type: pfam
Location: 60880 - 61539 (+)
Gene ID: HRGMv2_0372_13_43
Type: CAZyme
Location: 61671 - 63848 (-)
Gene ID: HRGMv2_0372_13_44
Type: CAZyme
Location: 63856 - 65745 (-)
Gene ID: HRGMv2_0372_13_45
Type: CAZyme
Location: 65847 - 67166 (-)
Gene ID: HRGMv2_0372_13_46
Type: CAZyme
Location: 67176 - 68489 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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