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Cluster: HRGMv2_0372_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0372_12 HRGMv2_0372_12_24 30573 31883 - 2.A.35.1.5
sulfatase HRGMv2_0372_12 HRGMv2_0372_12_25 32479 34434 - S1_48
CAZyme HRGMv2_0372_12 HRGMv2_0372_12_26 34583 36535 - GH18
pfam HRGMv2_0372_12 HRGMv2_0372_12_27 36612 37910 - BT_3987-like_N | Laminin_G_3
pfam HRGMv2_0372_12 HRGMv2_0372_12_28 37919 38929 - GH18_BT1044-like
TC HRGMv2_0372_12 HRGMv2_0372_12_29 38966 40609 - 8.A.46.2.2
TC HRGMv2_0372_12 HRGMv2_0372_12_30 40623 43994 - 1.B.14.6.13
STP HRGMv2_0372_12 HRGMv2_0372_12_31 44138 45109 - FecR
STP HRGMv2_0372_12 HRGMv2_0372_12_32 45529 46119 - Sigma70_r2 | Sigma70_r4_2
CAZyme HRGMv2_0372_12 HRGMv2_0372_12_33 46503 48749 - GH20
CAZyme HRGMv2_0372_12 HRGMv2_0372_12_34 48757 51069 - GH3
Gene ID: HRGMv2_0372_12_24
Type: TC
Location: 30573 - 31883 (-)
Gene ID: HRGMv2_0372_12_25
Type: sulfatase
Location: 32479 - 34434 (-)
Gene ID: HRGMv2_0372_12_26
Type: CAZyme
Location: 34583 - 36535 (-)
Gene ID: HRGMv2_0372_12_27
Type: pfam
Location: 36612 - 37910 (-)
Gene ID: HRGMv2_0372_12_28
Type: pfam
Location: 37919 - 38929 (-)
Gene ID: HRGMv2_0372_12_29
Type: TC
Location: 38966 - 40609 (-)
Gene ID: HRGMv2_0372_12_30
Type: TC
Location: 40623 - 43994 (-)
Gene ID: HRGMv2_0372_12_31
Type: STP
Location: 44138 - 45109 (-)
Gene ID: HRGMv2_0372_12_32
Type: STP
Location: 45529 - 46119 (-)
Gene ID: HRGMv2_0372_12_33
Type: CAZyme
Location: 46503 - 48749 (-)
Gene ID: HRGMv2_0372_12_34
Type: CAZyme
Location: 48757 - 51069 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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