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Cluster: HRGMv2_0372_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0372_10 HRGMv2_0372_10_59 69177 72392 + 1.B.14.6.1
pfam HRGMv2_0372_10 HRGMv2_0372_10_60 72411 74237 + SusD_RagB | SusD-like_2 | SusD-like_3
CAZyme HRGMv2_0372_10 HRGMv2_0372_10_61 74257 76152 + GH16_3
sulfatase HRGMv2_0372_10 HRGMv2_0372_10_62 76359 77942 + S1_11
CAZyme HRGMv2_0372_10 HRGMv2_0372_10_63 77939 80275 + GH20
CAZyme HRGMv2_0372_10 HRGMv2_0372_10_64 80297 83344 + GH2
CAZyme HRGMv2_0372_10 HRGMv2_0372_10_65 83347 86058 + GH16_3 | GH29
TF HRGMv2_0372_10 HRGMv2_0372_10_66 86331 86540 + HTH_3
pfam HRGMv2_0372_10 HRGMv2_0372_10_67 86544 87371 + Exo_endo_phos_3
TC HRGMv2_0372_10 HRGMv2_0372_10_68 87538 90267 + 4.A.2.1.17
Gene ID: HRGMv2_0372_10_59
Type: TC
Location: 69177 - 72392 (+)
Gene ID: HRGMv2_0372_10_60
Type: pfam
Location: 72411 - 74237 (+)
Gene ID: HRGMv2_0372_10_61
Type: CAZyme
Location: 74257 - 76152 (+)
Gene ID: HRGMv2_0372_10_62
Type: sulfatase
Location: 76359 - 77942 (+)
Gene ID: HRGMv2_0372_10_63
Type: CAZyme
Location: 77939 - 80275 (+)
Gene ID: HRGMv2_0372_10_64
Type: CAZyme
Location: 80297 - 83344 (+)
Gene ID: HRGMv2_0372_10_65
Type: CAZyme
Location: 83347 - 86058 (+)
Gene ID: HRGMv2_0372_10_66
Type: TF
Location: 86331 - 86540 (+)
Gene ID: HRGMv2_0372_10_67
Type: pfam
Location: 86544 - 87371 (+)
Gene ID: HRGMv2_0372_10_68
Type: TC
Location: 87538 - 90267 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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