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Cluster: HRGMv2_0372_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0372_10 HRGMv2_0372_10_34 40911 42074 + GH33
TC HRGMv2_0372_10 HRGMv2_0372_10_35 42394 42972 - 3.D.6.1.2
TC HRGMv2_0372_10 HRGMv2_0372_10_36 42975 43538 - 3.D.6.1.2
TC HRGMv2_0372_10 HRGMv2_0372_10_37 43552 44196 - 3.D.6.1.3
TC HRGMv2_0372_10 HRGMv2_0372_10_38 44230 45198 - 3.D.6.1.2
TC HRGMv2_0372_10 HRGMv2_0372_10_39 45245 46594 - 3.D.6.1.2
TC HRGMv2_0372_10 HRGMv2_0372_10_40 46610 47632 - 3.D.6.1.2
Gene ID: HRGMv2_0372_10_34
Type: CAZyme
Location: 40911 - 42074 (+)
Gene ID: HRGMv2_0372_10_35
Type: TC
Location: 42394 - 42972 (-)
Gene ID: HRGMv2_0372_10_36
Type: TC
Location: 42975 - 43538 (-)
Gene ID: HRGMv2_0372_10_37
Type: TC
Location: 43552 - 44196 (-)
Gene ID: HRGMv2_0372_10_38
Type: TC
Location: 44230 - 45198 (-)
Gene ID: HRGMv2_0372_10_39
Type: TC
Location: 45245 - 46594 (-)
Gene ID: HRGMv2_0372_10_40
Type: TC
Location: 46610 - 47632 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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