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Cluster: HRGMv2_0372_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0372_9 HRGMv2_0372_9_78 86256 87407 - 2.A.1.7.16
TC HRGMv2_0372_9 HRGMv2_0372_9_79 87742 89871 + 2.A.37.2.5
pfam HRGMv2_0372_9 HRGMv2_0372_9_80 89944 91248 + GTP_EFTU | MMR_HSR1 | MMR_HSR1 | FeoB_N | FeoB_N | AIG1 | KH_dom-like
CAZyme HRGMv2_0372_9 HRGMv2_0372_9_81 91880 94438 - GH84
TC HRGMv2_0372_9 HRGMv2_0372_9_82 94435 95613 - 9.B.97.3.1
STP HRGMv2_0372_9 HRGMv2_0372_9_83 95652 96263 - cNMP_binding
TC HRGMv2_0372_9 HRGMv2_0372_9_84 96305 97846 - 1.I.1.1.3
pfam HRGMv2_0372_9 HRGMv2_0372_9_85 97975 99324 - UPF0004 | TRAM | Radical_SAM
TC HRGMv2_0372_9 HRGMv2_0372_9_86 99608 100597 - 2.A.115.1.1
TC HRGMv2_0372_9 HRGMv2_0372_9_87 100732 101478 + 9.B.31.1.2
TC HRGMv2_0372_9 HRGMv2_0372_9_88 101595 103295 + 4.C.1.1.4
Gene ID: HRGMv2_0372_9_78
Type: TC
Location: 86256 - 87407 (-)
Gene ID: HRGMv2_0372_9_79
Type: TC
Location: 87742 - 89871 (+)
Gene ID: HRGMv2_0372_9_80
Type: pfam
Location: 89944 - 91248 (+)
Gene ID: HRGMv2_0372_9_81
Type: CAZyme
Location: 91880 - 94438 (-)
Gene ID: HRGMv2_0372_9_82
Type: TC
Location: 94435 - 95613 (-)
Gene ID: HRGMv2_0372_9_83
Type: STP
Location: 95652 - 96263 (-)
Gene ID: HRGMv2_0372_9_84
Type: TC
Location: 96305 - 97846 (-)
Gene ID: HRGMv2_0372_9_85
Type: pfam
Location: 97975 - 99324 (-)
Gene ID: HRGMv2_0372_9_86
Type: TC
Location: 99608 - 100597 (-)
Gene ID: HRGMv2_0372_9_87
Type: TC
Location: 100732 - 101478 (+)
Gene ID: HRGMv2_0372_9_88
Type: TC
Location: 101595 - 103295 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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