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Cluster: HRGMv2_0372_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0372_8 HRGMv2_0372_8_14 13348 14892 + CE19
pfam HRGMv2_0372_8 HRGMv2_0372_8_15 14894 16066 + DUF4861
CAZyme HRGMv2_0372_8 HRGMv2_0372_8_16 16204 17886 + GH28
CAZyme HRGMv2_0372_8 HRGMv2_0372_8_17 17912 19798 + PL1_2
CAZyme HRGMv2_0372_8 HRGMv2_0372_8_18 19893 21503 + CE12 | CE8
TF HRGMv2_0372_8 HRGMv2_0372_8_19 21847 26361 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_0372_8 HRGMv2_0372_8_20 26358 27569 + GH105
TC HRGMv2_0372_8 HRGMv2_0372_8_21 27842 31075 + 1.B.14.6.1
Gene ID: HRGMv2_0372_8_14
Type: CAZyme
Location: 13348 - 14892 (+)
Gene ID: HRGMv2_0372_8_15
Type: pfam
Location: 14894 - 16066 (+)
Gene ID: HRGMv2_0372_8_16
Type: CAZyme
Location: 16204 - 17886 (+)
Gene ID: HRGMv2_0372_8_17
Type: CAZyme
Location: 17912 - 19798 (+)
Gene ID: HRGMv2_0372_8_18
Type: CAZyme
Location: 19893 - 21503 (+)
Gene ID: HRGMv2_0372_8_19
Type: TF
Location: 21847 - 26361 (+)
Gene ID: HRGMv2_0372_8_20
Type: CAZyme
Location: 26358 - 27569 (+)
Gene ID: HRGMv2_0372_8_21
Type: TC
Location: 27842 - 31075 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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