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Cluster: HRGMv2_0372_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0372_7 HRGMv2_0372_7_52 48779 49033 + 1.E.43.1.10
NULL(UNKNOWN) HRGMv2_0372_7 HRGMv2_0372_7_53 49043 49240 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0372_7 HRGMv2_0372_7_54 49224 49841 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0372_7 HRGMv2_0372_7_55 49956 51308 + 2.A.62.1.3
pfam HRGMv2_0372_7 HRGMv2_0372_7_56 51408 51782 - 4HBT | FlK
pfam HRGMv2_0372_7 HRGMv2_0372_7_57 51979 52590 + DUF4294
TC HRGMv2_0372_7 HRGMv2_0372_7_58 52968 54299 + 3.A.5.1.1
pfam HRGMv2_0372_7 HRGMv2_0372_7_59 54542 55423 + GTP_EFTU | Ras | MMR_HSR1 | FeoB_N | KH_2 | PduV-EutP
STP HRGMv2_0372_7 HRGMv2_0372_7_60 55690 57678 + TPR_1 | TPR_1 | TPR_1 | TPR_1 | TPR_1 | TPR_1
TC HRGMv2_0372_7 HRGMv2_0372_7_61 57697 59067 + 2.A.1.53.5
CAZyme HRGMv2_0372_7 HRGMv2_0372_7_62 59677 60819 - GT4
TF HRGMv2_0372_7 HRGMv2_0372_7_63 61119 61676 + GerE
STP HRGMv2_0372_7 HRGMv2_0372_7_64 61797 62789 + FecR
TC HRGMv2_0372_7 HRGMv2_0372_7_65 62849 66259 + 1.B.14.6.1
Gene ID: HRGMv2_0372_7_52
Type: TC
Location: 48779 - 49033 (+)
Gene ID: HRGMv2_0372_7_53
Type:
Location: 49043 - 49240 (+)
Gene ID: HRGMv2_0372_7_54
Type:
Location: 49224 - 49841 (-)
Gene ID: HRGMv2_0372_7_55
Type: TC
Location: 49956 - 51308 (+)
Gene ID: HRGMv2_0372_7_56
Type: pfam
Location: 51408 - 51782 (-)
Gene ID: HRGMv2_0372_7_57
Type: pfam
Location: 51979 - 52590 (+)
Gene ID: HRGMv2_0372_7_58
Type: TC
Location: 52968 - 54299 (+)
Gene ID: HRGMv2_0372_7_59
Type: pfam
Location: 54542 - 55423 (+)
Gene ID: HRGMv2_0372_7_60
Type: STP
Location: 55690 - 57678 (+)
Gene ID: HRGMv2_0372_7_61
Type: TC
Location: 57697 - 59067 (+)
Gene ID: HRGMv2_0372_7_62
Type: CAZyme
Location: 59677 - 60819 (-)
Gene ID: HRGMv2_0372_7_63
Type: TF
Location: 61119 - 61676 (+)
Gene ID: HRGMv2_0372_7_64
Type: STP
Location: 61797 - 62789 (+)
Gene ID: HRGMv2_0372_7_65
Type: TC
Location: 62849 - 66259 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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