Cluster: HRGMv2_0372_CGC18

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0372_6	HRGMv2_0372_6_138	141998	145057	+	1.B.14.6.1
TC	HRGMv2_0372_6	HRGMv2_0372_6_139	145071	146648	+	8.A.46.1.3
pfam	HRGMv2_0372_6	HRGMv2_0372_6_140	146664	147527	+	Laminin_G_3
CAZyme	HRGMv2_0372_6	HRGMv2_0372_6_141	147553	149226	+	GH144
CAZyme	HRGMv2_0372_6	HRGMv2_0372_6_142	149258	151543	+	GH3
CAZyme	HRGMv2_0372_6	HRGMv2_0372_6_143	151557	152924	+	GH144

Gene ID: HRGMv2_0372_6_138
Type: TC
Location: 141998 - 145057 (+)

Gene ID: HRGMv2_0372_6_139
Type: TC
Location: 145071 - 146648 (+)

Gene ID: HRGMv2_0372_6_140
Type: pfam
Location: 146664 - 147527 (+)

Gene ID: HRGMv2_0372_6_141
Type: CAZyme
Location: 147553 - 149226 (+)

Gene ID: HRGMv2_0372_6_142
Type: CAZyme
Location: 149258 - 151543 (+)

Gene ID: HRGMv2_0372_6_143
Type: CAZyme
Location: 151557 - 152924 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0372_6_138	vegetarian > omnivore	1.19919	0.02614
HRGMv2_0372_6_139	vegetarian > omnivore	1.19442	0.02830
HRGMv2_0372_6_141	vegetarian > omnivore	1.28029	0.02614
HRGMv2_0372_6_142	vegetarian > omnivore	1.17435	0.02258