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Cluster: HRGMv2_0372_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0372_5 HRGMv2_0372_5_26 25836 27230 - GH18
sulfatase HRGMv2_0372_5 HRGMv2_0372_5_27 27244 28482 - S1_48
pfam HRGMv2_0372_5 HRGMv2_0372_5_28 28488 29591 - GH18_BT1044-like
TC HRGMv2_0372_5 HRGMv2_0372_5_29 29591 31156 - 8.A.46.2.2
TC HRGMv2_0372_5 HRGMv2_0372_5_30 31170 34520 - 1.B.14.6.13
STP HRGMv2_0372_5 HRGMv2_0372_5_31 34770 35813 - FecR
STP HRGMv2_0372_5 HRGMv2_0372_5_32 35885 36460 - Sigma70_r2 | Sigma70_r4_2
CAZyme HRGMv2_0372_5 HRGMv2_0372_5_33 36706 39279 - GH2
Gene ID: HRGMv2_0372_5_26
Type: CAZyme
Location: 25836 - 27230 (-)
Gene ID: HRGMv2_0372_5_27
Type: sulfatase
Location: 27244 - 28482 (-)
Gene ID: HRGMv2_0372_5_28
Type: pfam
Location: 28488 - 29591 (-)
Gene ID: HRGMv2_0372_5_29
Type: TC
Location: 29591 - 31156 (-)
Gene ID: HRGMv2_0372_5_30
Type: TC
Location: 31170 - 34520 (-)
Gene ID: HRGMv2_0372_5_31
Type: STP
Location: 34770 - 35813 (-)
Gene ID: HRGMv2_0372_5_32
Type: STP
Location: 35885 - 36460 (-)
Gene ID: HRGMv2_0372_5_33
Type: CAZyme
Location: 36706 - 39279 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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