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Cluster: HRGMv2_0372_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0372_1 HRGMv2_0372_1_129 163372 165624 - GH92
CAZyme HRGMv2_0372_1 HRGMv2_0372_1_130 165656 169198 - GH125 | GH92
CAZyme HRGMv2_0372_1 HRGMv2_0372_1_131 169195 171453 - GH92
CAZyme HRGMv2_0372_1 HRGMv2_0372_1_132 171453 172460 - GH130_2
TC HRGMv2_0372_1 HRGMv2_0372_1_133 172741 173610 - 3.A.2.1.5
TC HRGMv2_0372_1 HRGMv2_0372_1_134 173615 175198 - 3.A.2.1.2
pfam HRGMv2_0372_1 HRGMv2_0372_1_135 175201 175758 - OSCP
pfam HRGMv2_0372_1 HRGMv2_0372_1_136 175743 176261 - ATP-synt_B
TC HRGMv2_0372_1 HRGMv2_0372_1_137 176282 176497 - 3.A.2.1.6
TC HRGMv2_0372_1 HRGMv2_0372_1_138 176547 177626 - 3.A.2.1.7
pfam HRGMv2_0372_1 HRGMv2_0372_1_139 177623 177895 - ATP-synt_DE_N
TC HRGMv2_0372_1 HRGMv2_0372_1_140 177917 179437 - 3.A.2.1.2
Gene ID: HRGMv2_0372_1_129
Type: CAZyme
Location: 163372 - 165624 (-)
Gene ID: HRGMv2_0372_1_130
Type: CAZyme
Location: 165656 - 169198 (-)
Gene ID: HRGMv2_0372_1_131
Type: CAZyme
Location: 169195 - 171453 (-)
Gene ID: HRGMv2_0372_1_132
Type: CAZyme
Location: 171453 - 172460 (-)
Gene ID: HRGMv2_0372_1_133
Type: TC
Location: 172741 - 173610 (-)
Gene ID: HRGMv2_0372_1_134
Type: TC
Location: 173615 - 175198 (-)
Gene ID: HRGMv2_0372_1_135
Type: pfam
Location: 175201 - 175758 (-)
Gene ID: HRGMv2_0372_1_136
Type: pfam
Location: 175743 - 176261 (-)
Gene ID: HRGMv2_0372_1_137
Type: TC
Location: 176282 - 176497 (-)
Gene ID: HRGMv2_0372_1_138
Type: TC
Location: 176547 - 177626 (-)
Gene ID: HRGMv2_0372_1_139
Type: pfam
Location: 177623 - 177895 (-)
Gene ID: HRGMv2_0372_1_140
Type: TC
Location: 177917 - 179437 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0372_1_137 vegetarian > omnivore 1.67898 0.02974

🧭 Explore Read Mapping of CGC

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