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Cluster: HRGMv2_0366_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0366_1 HRGMv2_0366_1_362 427583 427933 + 3.D.1.8.1
TC HRGMv2_0366_1 HRGMv2_0366_1_363 427954 428577 + 3.D.1.3.1
TC HRGMv2_0366_1 HRGMv2_0366_1_364 428574 430193 + 3.D.1.5.1
TC HRGMv2_0366_1 HRGMv2_0366_1_365 430211 431287 + 3.D.1.5.1
STP HRGMv2_0366_1 HRGMv2_0366_1_366 431290 431730 + Fer4 | Fer4
TC HRGMv2_0366_1 HRGMv2_0366_1_367 431734 432243 + 3.D.9.1.1
TC HRGMv2_0366_1 HRGMv2_0366_1_368 432257 432565 + 3.D.1.2.1
TC HRGMv2_0366_1 HRGMv2_0366_1_369 432585 434480 + 3.D.9.1.1
TC HRGMv2_0366_1 HRGMv2_0366_1_370 434493 435977 + 3.D.1.5.1
TC HRGMv2_0366_1 HRGMv2_0366_1_371 435984 437408 + 3.D.1.2.1
CAZyme HRGMv2_0366_1 HRGMv2_0366_1_372 437552 439126 + GT22
pfam HRGMv2_0366_1 HRGMv2_0366_1_373 439047 439619 - DNA_binding_1 | Methyltransf_1N
TC HRGMv2_0366_1 HRGMv2_0366_1_374 439619 441751 - 8.A.51.1.1
NULL(UNKNOWN) HRGMv2_0366_1 HRGMv2_0366_1_375 441818 442504 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0366_1 HRGMv2_0366_1_376 442521 443522 - GH73
pfam HRGMv2_0366_1 HRGMv2_0366_1_377 443600 444205 + DUF4254
CAZyme HRGMv2_0366_1 HRGMv2_0366_1_378 444189 445223 + GT9
Gene ID: HRGMv2_0366_1_362
Type: TC
Location: 427583 - 427933 (+)
Gene ID: HRGMv2_0366_1_363
Type: TC
Location: 427954 - 428577 (+)
Gene ID: HRGMv2_0366_1_364
Type: TC
Location: 428574 - 430193 (+)
Gene ID: HRGMv2_0366_1_365
Type: TC
Location: 430211 - 431287 (+)
Gene ID: HRGMv2_0366_1_366
Type: STP
Location: 431290 - 431730 (+)
Gene ID: HRGMv2_0366_1_367
Type: TC
Location: 431734 - 432243 (+)
Gene ID: HRGMv2_0366_1_368
Type: TC
Location: 432257 - 432565 (+)
Gene ID: HRGMv2_0366_1_369
Type: TC
Location: 432585 - 434480 (+)
Gene ID: HRGMv2_0366_1_370
Type: TC
Location: 434493 - 435977 (+)
Gene ID: HRGMv2_0366_1_371
Type: TC
Location: 435984 - 437408 (+)
Gene ID: HRGMv2_0366_1_372
Type: CAZyme
Location: 437552 - 439126 (+)
Gene ID: HRGMv2_0366_1_373
Type: pfam
Location: 439047 - 439619 (-)
Gene ID: HRGMv2_0366_1_374
Type: TC
Location: 439619 - 441751 (-)
Gene ID: HRGMv2_0366_1_375
Type:
Location: 441818 - 442504 (-)
Gene ID: HRGMv2_0366_1_376
Type: CAZyme
Location: 442521 - 443522 (-)
Gene ID: HRGMv2_0366_1_377
Type: pfam
Location: 443600 - 444205 (+)
Gene ID: HRGMv2_0366_1_378
Type: CAZyme
Location: 444189 - 445223 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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