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Cluster: HRGMv2_0366_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0366_13 HRGMv2_0366_13_1 3 2066 - GH97
CAZyme HRGMv2_0366_13 HRGMv2_0366_13_2 2079 3956 - GH13_46
CAZyme HRGMv2_0366_13 HRGMv2_0366_13_3 3991 5445 - GH13
CAZyme HRGMv2_0366_13 HRGMv2_0366_13_4 5456 7774 - GH13_36
pfam HRGMv2_0366_13 HRGMv2_0366_13_5 7882 9696 - SusE
TC HRGMv2_0366_13 HRGMv2_0366_13_6 9720 11378 - 8.A.46.1.1
TC HRGMv2_0366_13 HRGMv2_0366_13_7 11392 14415 - 1.B.14.6.1
TC HRGMv2_0366_13 HRGMv2_0366_13_8 14477 15784 - 2.A.2.6.2
Gene ID: HRGMv2_0366_13_1
Type: CAZyme
Location: 3 - 2066 (-)
Gene ID: HRGMv2_0366_13_2
Type: CAZyme
Location: 2079 - 3956 (-)
Gene ID: HRGMv2_0366_13_3
Type: CAZyme
Location: 3991 - 5445 (-)
Gene ID: HRGMv2_0366_13_4
Type: CAZyme
Location: 5456 - 7774 (-)
Gene ID: HRGMv2_0366_13_5
Type: pfam
Location: 7882 - 9696 (-)
Gene ID: HRGMv2_0366_13_6
Type: TC
Location: 9720 - 11378 (-)
Gene ID: HRGMv2_0366_13_7
Type: TC
Location: 11392 - 14415 (-)
Gene ID: HRGMv2_0366_13_8
Type: TC
Location: 14477 - 15784 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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