Cluster: HRGMv2_0366_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0366
- CGC Family ID: CGCFAM_00441
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0366_9 | HRGMv2_0366_9_27 | 39799 | 41025 | - | GH172 |
| NULL(UNKNOWN) | HRGMv2_0366_9 | HRGMv2_0366_9_28 | 41031 | 41891 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0366_9 | HRGMv2_0366_9_29 | 41925 | 43655 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0366_9 | HRGMv2_0366_9_30 | 43668 | 46772 | - | 1.B.14.6.1 |
| pfam | HRGMv2_0366_9 | HRGMv2_0366_9_31 | 46806 | 48359 | - | ADP_ribosyl_GH |
| CAZyme | HRGMv2_0366_9 | HRGMv2_0366_9_32 | 48356 | 49489 | - | GH18 |
Gene ID: HRGMv2_0366_9_27
Type: CAZyme
Location: 39799 - 41025 (-)
Type: CAZyme
Location: 39799 - 41025 (-)
Gene ID: HRGMv2_0366_9_28
Type:
Location: 41031 - 41891 (-)
Type:
Location: 41031 - 41891 (-)
Gene ID: HRGMv2_0366_9_29
Type: pfam
Location: 41925 - 43655 (-)
Type: pfam
Location: 41925 - 43655 (-)
Gene ID: HRGMv2_0366_9_30
Type: TC
Location: 43668 - 46772 (-)
Type: TC
Location: 43668 - 46772 (-)
Gene ID: HRGMv2_0366_9_31
Type: pfam
Location: 46806 - 48359 (-)
Type: pfam
Location: 46806 - 48359 (-)
Gene ID: HRGMv2_0366_9_32
Type: CAZyme
Location: 48356 - 49489 (-)
Type: CAZyme
Location: 48356 - 49489 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp022782405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.