dbCAN Logo

Cluster: HRGMv2_0365_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0365_4 HRGMv2_0365_4_8 9469 9819 + 3.D.1.8.1
TC HRGMv2_0365_4 HRGMv2_0365_4_9 9840 10463 + 3.D.1.3.1
TC HRGMv2_0365_4 HRGMv2_0365_4_10 10460 12079 + 3.D.1.5.1
TC HRGMv2_0365_4 HRGMv2_0365_4_11 12097 13173 + 3.D.1.5.1
STP HRGMv2_0365_4 HRGMv2_0365_4_12 13176 13616 + Fer4 | Fer4
TC HRGMv2_0365_4 HRGMv2_0365_4_13 13620 14129 + 3.D.9.1.1
TC HRGMv2_0365_4 HRGMv2_0365_4_14 14145 14453 + 3.D.1.2.1
TC HRGMv2_0365_4 HRGMv2_0365_4_15 14473 16368 + 3.D.9.1.1
TC HRGMv2_0365_4 HRGMv2_0365_4_16 16381 17865 + 3.D.1.2.1
TC HRGMv2_0365_4 HRGMv2_0365_4_17 17872 19296 + 3.D.1.2.1
CAZyme HRGMv2_0365_4 HRGMv2_0365_4_18 19444 21018 + GT22
Gene ID: HRGMv2_0365_4_8
Type: TC
Location: 9469 - 9819 (+)
Gene ID: HRGMv2_0365_4_9
Type: TC
Location: 9840 - 10463 (+)
Gene ID: HRGMv2_0365_4_10
Type: TC
Location: 10460 - 12079 (+)
Gene ID: HRGMv2_0365_4_11
Type: TC
Location: 12097 - 13173 (+)
Gene ID: HRGMv2_0365_4_12
Type: STP
Location: 13176 - 13616 (+)
Gene ID: HRGMv2_0365_4_13
Type: TC
Location: 13620 - 14129 (+)
Gene ID: HRGMv2_0365_4_14
Type: TC
Location: 14145 - 14453 (+)
Gene ID: HRGMv2_0365_4_15
Type: TC
Location: 14473 - 16368 (+)
Gene ID: HRGMv2_0365_4_16
Type: TC
Location: 16381 - 17865 (+)
Gene ID: HRGMv2_0365_4_17
Type: TC
Location: 17872 - 19296 (+)
Gene ID: HRGMv2_0365_4_18
Type: CAZyme
Location: 19444 - 21018 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List