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Cluster: HRGMv2_0365_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0365_17 HRGMv2_0365_17_27 30561 31874 - 9.B.33.1.2
pfam HRGMv2_0365_17 HRGMv2_0365_17_28 31881 32423 - Hexapep | Hexapep | Hexapep | Hexapep_2
pfam HRGMv2_0365_17 HRGMv2_0365_17_29 32465 33247 - PRA-PH | MazG | MazG
CAZyme HRGMv2_0365_17 HRGMv2_0365_17_30 33334 35493 + GH20
pfam HRGMv2_0365_17 HRGMv2_0365_17_31 35570 38035 - tRNA_bind | FDX-ACB | B3_4 | B5 | tRNA_synthFbeta
TC HRGMv2_0365_17 HRGMv2_0365_17_32 38174 39070 - 2.A.7.3.57
pfam HRGMv2_0365_17 HRGMv2_0365_17_33 39076 40233 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
sulfatase HRGMv2_0365_17 HRGMv2_0365_17_34 40532 42322 + S1_97
TC HRGMv2_0365_17 HRGMv2_0365_17_35 42345 44252 + 4.C.1.1.14
Gene ID: HRGMv2_0365_17_27
Type: TC
Location: 30561 - 31874 (-)
Gene ID: HRGMv2_0365_17_28
Type: pfam
Location: 31881 - 32423 (-)
Gene ID: HRGMv2_0365_17_29
Type: pfam
Location: 32465 - 33247 (-)
Gene ID: HRGMv2_0365_17_30
Type: CAZyme
Location: 33334 - 35493 (+)
Gene ID: HRGMv2_0365_17_31
Type: pfam
Location: 35570 - 38035 (-)
Gene ID: HRGMv2_0365_17_32
Type: TC
Location: 38174 - 39070 (-)
Gene ID: HRGMv2_0365_17_33
Type: pfam
Location: 39076 - 40233 (-)
Gene ID: HRGMv2_0365_17_34
Type: sulfatase
Location: 40532 - 42322 (+)
Gene ID: HRGMv2_0365_17_35
Type: TC
Location: 42345 - 44252 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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