dbCAN Logo

Cluster: HRGMv2_0365_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0365_11 HRGMv2_0365_11_5 3778 6399 + GH77
TF HRGMv2_0365_11 HRGMv2_0365_11_6 6590 7357 - LytTR
TC HRGMv2_0365_11 HRGMv2_0365_11_7 7354 8730 - 8.A.59.2.1
TC HRGMv2_0365_11 HRGMv2_0365_11_8 8933 10261 + 2.A.2.6.2
TC HRGMv2_0365_11 HRGMv2_0365_11_9 10309 13332 + 1.B.14.6.1
TC HRGMv2_0365_11 HRGMv2_0365_11_10 13349 15013 + 8.A.46.1.1
pfam HRGMv2_0365_11 HRGMv2_0365_11_11 15033 16832 + SusE
CAZyme HRGMv2_0365_11 HRGMv2_0365_11_12 16938 19244 + GH13_36
CAZyme HRGMv2_0365_11 HRGMv2_0365_11_13 19261 20652 + GH13
CAZyme HRGMv2_0365_11 HRGMv2_0365_11_14 20698 22578 + GH13_46
CAZyme HRGMv2_0365_11 HRGMv2_0365_11_15 22594 24789 + GH97
Gene ID: HRGMv2_0365_11_5
Type: CAZyme
Location: 3778 - 6399 (+)
Gene ID: HRGMv2_0365_11_6
Type: TF
Location: 6590 - 7357 (-)
Gene ID: HRGMv2_0365_11_7
Type: TC
Location: 7354 - 8730 (-)
Gene ID: HRGMv2_0365_11_8
Type: TC
Location: 8933 - 10261 (+)
Gene ID: HRGMv2_0365_11_9
Type: TC
Location: 10309 - 13332 (+)
Gene ID: HRGMv2_0365_11_10
Type: TC
Location: 13349 - 15013 (+)
Gene ID: HRGMv2_0365_11_11
Type: pfam
Location: 15033 - 16832 (+)
Gene ID: HRGMv2_0365_11_12
Type: CAZyme
Location: 16938 - 19244 (+)
Gene ID: HRGMv2_0365_11_13
Type: CAZyme
Location: 19261 - 20652 (+)
Gene ID: HRGMv2_0365_11_14
Type: CAZyme
Location: 20698 - 22578 (+)
Gene ID: HRGMv2_0365_11_15
Type: CAZyme
Location: 22594 - 24789 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0365_11_6 vegan > omnivore 1.08298 0.02695

🧭 Explore Read Mapping of CGC

← Back to Cluster List