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Cluster: HRGMv2_0365_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0365_10 HRGMv2_0365_10_45 49549 50700 + GH33
TC HRGMv2_0365_10 HRGMv2_0365_10_46 50782 51360 - 3.D.6.1.2
TC HRGMv2_0365_10 HRGMv2_0365_10_47 51365 51949 - 3.D.6.1.2
TC HRGMv2_0365_10 HRGMv2_0365_10_48 51942 52646 - 3.D.6.1.4
TC HRGMv2_0365_10 HRGMv2_0365_10_49 52660 53625 - 3.D.6.1.2
TC HRGMv2_0365_10 HRGMv2_0365_10_50 53651 54994 - 3.D.6.1.2
TC HRGMv2_0365_10 HRGMv2_0365_10_51 55013 56059 - 3.D.6.1.2
Gene ID: HRGMv2_0365_10_45
Type: CAZyme
Location: 49549 - 50700 (+)
Gene ID: HRGMv2_0365_10_46
Type: TC
Location: 50782 - 51360 (-)
Gene ID: HRGMv2_0365_10_47
Type: TC
Location: 51365 - 51949 (-)
Gene ID: HRGMv2_0365_10_48
Type: TC
Location: 51942 - 52646 (-)
Gene ID: HRGMv2_0365_10_49
Type: TC
Location: 52660 - 53625 (-)
Gene ID: HRGMv2_0365_10_50
Type: TC
Location: 53651 - 54994 (-)
Gene ID: HRGMv2_0365_10_51
Type: TC
Location: 55013 - 56059 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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