Cluster: HRGMv2_0360_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0360
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0360_1 | HRGMv2_0360_1_353 | 422428 | 424176 | + | GH109 |
| pfam | HRGMv2_0360_1 | HRGMv2_0360_1_354 | 424258 | 427464 | - | ACR_tran | ACR_tran |
| pfam | HRGMv2_0360_1 | HRGMv2_0360_1_355 | 427472 | 428959 | - | OEP | OEP |
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_356 | 428940 | 432020 | - | 2.A.6.3.6 |
Gene ID: HRGMv2_0360_1_353
Type: CAZyme
Location: 422428 - 424176 (+)
Type: CAZyme
Location: 422428 - 424176 (+)
Gene ID: HRGMv2_0360_1_354
Type: pfam
Location: 424258 - 427464 (-)
Type: pfam
Location: 424258 - 427464 (-)
Gene ID: HRGMv2_0360_1_355
Type: pfam
Location: 427472 - 428959 (-)
Type: pfam
Location: 427472 - 428959 (-)
Gene ID: HRGMv2_0360_1_356
Type: TC
Location: 428940 - 432020 (-)
Type: TC
Location: 428940 - 432020 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola mediterraneensis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.