Cluster: HRGMv2_0360_CGC63
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0360
- CGC Family ID: CGCFAM_01220
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_3643 | 4330817 | 4331533 | + | 9.B.186.1.3 |
| CAZyme | HRGMv2_0360_1 | HRGMv2_0360_1_3644 | 4331620 | 4332315 | + | GT51 |
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_3645 | 4332320 | 4332958 | - | 1.A.62.2.1 |
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_3646 | 4332969 | 4334438 | - | 9.B.168.1.2 |
| peptidase | HRGMv2_0360_1 | HRGMv2_0360_1_3647 | 4334785 | 4336383 | + | C26.964 |
| TC | HRGMv2_0360_1 | HRGMv2_0360_1_3648 | 4336413 | 4338269 | + | 2.A.9.3.1 |
Gene ID: HRGMv2_0360_1_3643
Type: TC
Location: 4330817 - 4331533 (+)
Type: TC
Location: 4330817 - 4331533 (+)
Gene ID: HRGMv2_0360_1_3644
Type: CAZyme
Location: 4331620 - 4332315 (+)
Type: CAZyme
Location: 4331620 - 4332315 (+)
Gene ID: HRGMv2_0360_1_3645
Type: TC
Location: 4332320 - 4332958 (-)
Type: TC
Location: 4332320 - 4332958 (-)
Gene ID: HRGMv2_0360_1_3646
Type: TC
Location: 4332969 - 4334438 (-)
Type: TC
Location: 4332969 - 4334438 (-)
Gene ID: HRGMv2_0360_1_3647
Type: peptidase
Location: 4334785 - 4336383 (+)
Type: peptidase
Location: 4334785 - 4336383 (+)
Gene ID: HRGMv2_0360_1_3648
Type: TC
Location: 4336413 - 4338269 (+)
Type: TC
Location: 4336413 - 4338269 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola mediterraneensis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.